CDS

Accession Number TCMCG016C08863
gbkey CDS
Protein Id OMO86705.1
Location join(4527..5121,5217..5436,5527..5637,6057..6246,6453..6762,6888..7114,7531..7587,8014..8094,8250..8313,8525..8624,8705..8788,9113..9305,9408..9500,9711..10028)
Organism Corchorus capsularis
locus_tag CCACVL1_09510

Protein

Length 880aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009408.1
Definition hypothetical protein CCACVL1_09510 [Corchorus capsularis]
Locus_tag CCACVL1_09510

EGGNOG-MAPPER Annotation

COG_category L
Description Belongs to the helicase family. RecQ subfamily
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10900        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009378        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043138        [VIEW IN EMBL-EBI]
GO:0043140        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGCAAATAATGCATCGTCTGATCAAGTTATTGAAAAGCTCATTGAAATGGGTTTTGAGAAATCTGATGCCATTGAAGCTGTGAAAGCTGTTGGAGCATCCGTTGATGAAGCAGTTCAGTATGTATTGAATGGTTCCCGTAGAAATAGTCACAGTGCATCAACTGGTTCTCAATCCTCTTCAGGGAATGGAAAATGTCTGGGTAAAAGAGCCACATCCTCTTCGGACGGTAAAATGCGTCAGTCTAGGATTTGGGATCGTTTTCAACCCAAAGCTGAACCTAAAGGTCCTAAACGGACTAGAGGCAATGGCATAGTTGATGCAGTTATTTCTGGATCCCAGGTGTTGCCTAGTCATGTAGTAGAAGACATGGGACAATCACCTTCTATAAATAATCAACTTGAAACTGCGCCATATCCATTACAAGTTTGCTTCTCTGAGGAGCTAGATTGCGGATCAAATTGGGAGCCAAAGGCTAACAGTTTATTAAGGAAGCATTTTGGTTATTCATCCTTGAAGAGTTTCCAGAAGGAAGCATTGGCTGCTTGGCTTTCTCACCAAGACTGTCTTGTGCTTGCTGCAACAGGATCTGGAAAATCACTTTGTTTCCAGATTCCAGCATTGTTAACAGGAAAGGTGGTAGTTGTGGTTTCTCCTTTGATAAGTTTGATGCATGACCAATGCTTAAAATTATCAAAACATGGGGTCTCTGCTTGTTTTCTTGGATCTGGGCAACCAGACAGCAGTGTGGAAAAGAAAGCCATGAGAGGCATGTATAGTATTATATATGTCTGTCCAGAGACAATTCTGAGGCTAGTAGAACCTCTTCAGAGGCTAGCAGAAAATTGTGGAATCACATTGTTTGCAATTGATGAAGTCCATTGTGTATCAAAGTGGGGCCATGATTTTCGGCCTGACTACAGGCGATTGTCTGTGTTGCGAGAGAATTTCAGTGCAAGAAATTTAAAATTCTTGAAATTTGACATCCCAATTATGGCATTGACTGCTACTGCCACAGTTCGAGTTCAACAAGACATTCTTGATTCTTTATGCATGCCGAAGGAGACAAAGATTGTACTCACTTCATTTTTCCGTCCAAATTTGCGATTCTCAGTAAAACATAGTAGAACAACATCGTCTTCATATGAGACAGATTTCAGCCATCTTATTGATGTTTATGCCAGAAAGAAAAAGATTGGCGAGAGGAAACAAACTCTAATCGCACAAGAATTTCATGGTCAATCTGATTCAGATCAGTCATCTGGAAGCGATTTGAATGACAGTGAAGATAGTGATATTGACAAAAGTGACGATGAAAATTCAAATCAGAAAAATGGTTCAATTTCTTCAAGGGAAAGGCAAATGTCCGTAGAATATTTAGAAAACGAGGTTGACGTCTTTCAGACTGTGGAAGATTGGGATGTTGCTTATGGTGAATTTTCTGGTCAACCTCACATTGAAGAATGGGATTTACAGGGGTCAGTTGAGACAACTGATCCACCAAATAAACCAGAAGAAAGGCTGAGGCTTCTGCAAGAACCTCTAGAAGAAGGACCTACCATCATTTATGTTCTTACAAGAAAGGAAACAGTGAACATTGCAAATTTTCTTTGCAAGTTTGGAGTTAAGGCTGCGGCTTACAATGCCTCGTTGCCGAAATCACATCTAAGGCGAGTTCACAAGGAATTTCATGAAAACTCCCTAGAGGTTGTTGTTGCGACCATTGCTTTTGGAATGGGGATTGACAAGTTAAATGTTAGAAGAATTATTCATTATGGTTGGCCACAGAGTTTGGAAGCATATTATCAAGAAGCTGGTCGAGCAGGAAGAGATGGAAAATTAGCAGATTGTGTTTTATATGCAAACTTATCAAGAGTGCCAACACTTCTTCCTAGTAAAAGAAGTGAAGAGCAGGCAAAAGAGGCGTATAAAATGTTATCTGATTGCTTCAGATACGGAATGAATACTTCTTGCTGTCGAGCCAGAACCCTTGTTGAGTATTTTGGGGAAGATTTTCATAATGAGAAGTGCCTCTTGTGTGACATTTGTGTTGATGGACCTCCTAAAATGCAGGATGTAAGAGAGGAGGCAAATATTTTGATGCAAATTCTTGCTGCTCGTTATGGAAGTAGTTTTATGGATTGTTCTTACGATGATCCTCTAATTGAACAACAAAAGTTCCTAGAGAGGCCAAACCTCAGAACTTTTGTCAATAAAATAAGGGAGCAGTCTCAAAAATTCTTAGCCACTGATCTACTATGGTGGAAAGGTCTTGCTAGAATCATGGAAGCCAAAGGATATATCAAAGAAGGGGATGATAAGATTCATGTTCAGATAAAATTCCCAGAACCAACAAAAAAAGGGTTGGAGTTTATCCAATCTGGAAATGAAGAAGCATTCCATGTTTGTCCTGAAGCAGATATGATTCTCTCAAAAAAGAGAGAACCAGGAGCTTATTCCACTTGGGGAAAGGGCTGGGCTGATCCTGAGATCCGTCGTCAGCGCTTAACAAAAAGGCGGTTAAACAGGAAACCACGAAAGCCACGGAAACCAAGAATAAGGAATTCAAAGAAACATTTCTCAGACTTGAGTACTGCCCGTGGTAGAATATCAGCAAAAATCTCAAAACAGAAGAGATGA
Protein:  
MDANNASSDQVIEKLIEMGFEKSDAIEAVKAVGASVDEAVQYVLNGSRRNSHSASTGSQSSSGNGKCLGKRATSSSDGKMRQSRIWDRFQPKAEPKGPKRTRGNGIVDAVISGSQVLPSHVVEDMGQSPSINNQLETAPYPLQVCFSEELDCGSNWEPKANSLLRKHFGYSSLKSFQKEALAAWLSHQDCLVLAATGSGKSLCFQIPALLTGKVVVVVSPLISLMHDQCLKLSKHGVSACFLGSGQPDSSVEKKAMRGMYSIIYVCPETILRLVEPLQRLAENCGITLFAIDEVHCVSKWGHDFRPDYRRLSVLRENFSARNLKFLKFDIPIMALTATATVRVQQDILDSLCMPKETKIVLTSFFRPNLRFSVKHSRTTSSSYETDFSHLIDVYARKKKIGERKQTLIAQEFHGQSDSDQSSGSDLNDSEDSDIDKSDDENSNQKNGSISSRERQMSVEYLENEVDVFQTVEDWDVAYGEFSGQPHIEEWDLQGSVETTDPPNKPEERLRLLQEPLEEGPTIIYVLTRKETVNIANFLCKFGVKAAAYNASLPKSHLRRVHKEFHENSLEVVVATIAFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVLYANLSRVPTLLPSKRSEEQAKEAYKMLSDCFRYGMNTSCCRARTLVEYFGEDFHNEKCLLCDICVDGPPKMQDVREEANILMQILAARYGSSFMDCSYDDPLIEQQKFLERPNLRTFVNKIREQSQKFLATDLLWWKGLARIMEAKGYIKEGDDKIHVQIKFPEPTKKGLEFIQSGNEEAFHVCPEADMILSKKREPGAYSTWGKGWADPEIRRQRLTKRRLNRKPRKPRKPRIRNSKKHFSDLSTARGRISAKISKQKR